STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK85577.1Internalin putative. (848 aa)    
Predicted Functional Partners:
GAK85582.1
Hypothetical protein.
 
  
 
0.848
GAK85578.1
Internalin putative.
 
    
0.818
GAK85574.1
Internalin putative.
    
  0.812
GAK85576.1
Internalin putative.
    
  0.812
GAK85579.1
Internalin putative.
    
  0.790
GAK85581.1
Internalin putative.
    
 
0.790
GAK85575.1
Internalin putative.
       0.773
GAK84039.1
Sensor protein TorS.
   
 
  0.755
GAK82646.1
Sensory box sensor histidine kinase.
   
 
  0.755
GAK82647.1
Sensory box sensor histidine kinase.
   
 
  0.755
Your Current Organism:
Vibrio ponticus
NCBI taxonomy Id: 265668
Other names: CCUG 50742, CECT 5869, DSM 16217, V. ponticus, Vibrio ponticus Macian et al. 2005, Vibrio sp. JCM 19238, strain 369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.