STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK85668.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
GAK87837.1
Thiamine kinase.
     
 0.782
hldE
ADP-heptose synthase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
    
  0.737
GAK82783.1
methylcrotonyl-CoA carboxylase carboxyl transferase subunit.
    
 0.736
GAK82784.1
methylcrotonyl-CoA carboxylase carboxyl transferase subunit.
    
 0.736
GAK85230.1
Acetolactate synthase large subunit.
  
 
 0.733
GAK85231.1
Acetolactate synthase large subunit.
  
 
 0.733
GAK87158.1
Acetolactate synthase large subunit.
  
 
 0.733
GAK85714.1
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.730
GAK85715.1
Glycerol-3-phosphate dehydrogenase.
    
 0.730
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
    
  0.729
Your Current Organism:
Vibrio ponticus
NCBI taxonomy Id: 265668
Other names: CCUG 50742, CECT 5869, DSM 16217, V. ponticus, Vibrio ponticus Macian et al. 2005, Vibrio sp. JCM 19238, strain 369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.