STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK85765.1Phosphoribulokinase homolog. (149 aa)    
Predicted Functional Partners:
GAK85763.1
Phosphoribulokinase homolog.
     0.980
GAK85764.1
Phosphoribulokinase homolog.
     0.978
GAK85753.1
Acetylornithine aminotransferase.
 
      0.746
GAK82482.1
Ribulose-phosphate 3-epimerase.
  
 
 0.606
GAK85749.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.606
GAK85777.1
Ribulose-phosphate 3-epimerase.
  
 
 0.606
GAK85226.1
Ribose 5-phosphate isomerase A.
     
 0.498
GAK85227.1
Ribose 5-phosphate isomerase A.
     
 0.498
GAK85766.1
Hypothetical protein; Belongs to the UPF0270 family.
       0.496
GAK83515.1
Cytosol aminopeptidase PepA.
  
     0.476
Your Current Organism:
Vibrio ponticus
NCBI taxonomy Id: 265668
Other names: CCUG 50742, CECT 5869, DSM 16217, V. ponticus, Vibrio ponticus Macian et al. 2005, Vibrio sp. JCM 19238, strain 369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.