STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK85843.1Chemotaxis protein CheX. (153 aa)    
Predicted Functional Partners:
GAK87582.1
Chemotaxis protein CheC.
 
 0.965
GAK82522.1
Chemotaxis protein CheV.
 
 
 0.942
GAK82903.1
Chemotaxis protein CheV.
 
 
 0.941
GAK87733.1
Chemotaxis protein CheV.
   
 0.931
GAK85129.1
Aerobic respiration control sensor protein ArcB.
 
 
 0.922
GAK87115.1
Chemotaxis regulator.
 
 
 0.920
GAK87599.1
Signal transduction histidine kinase.
  
 0.917
GAK87600.1
Signal transduction histidine kinase.
  
 0.917
GAK85128.1
Aerobic respiration control sensor protein ArcB.
   
 0.911
GAK86729.1
Sensory box histidine kinase.
   
 0.911
Your Current Organism:
Vibrio ponticus
NCBI taxonomy Id: 265668
Other names: CCUG 50742, CECT 5869, DSM 16217, V. ponticus, Vibrio ponticus Macian et al. 2005, Vibrio sp. JCM 19238, strain 369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.