STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK86890.1Type I restriction-modification system restriction subunit R. (156 aa)    
Predicted Functional Partners:
GAK86891.1
Type I restriction-modification system restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
     0.994
GAK83426.1
Type I restriction-modification system restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
     0.976
GAK86895.1
Type I restriction-modification system DNA-methyltransferase subunit M.
 
 
 0.962
GAK86896.1
Type I restriction-modification system DNA-methyltransferase subunit M.
 
 
 0.957
GAK83420.1
Type I restriction-modification system DNA-methyltransferase subunit M.
 
 
 0.940
GAK83422.1
Type I restriction-modification system DNA-methyltransferase subunit M.
 
 
 0.940
GAK83421.1
Type I restriction-modification system DNA-methyltransferase subunit M.
 
 
 0.939
GAK86894.1
Type I restriction-modification system specificity subunit S.
 
  
 0.936
GAK86889.1
Type I restriction-modification system restriction subunit R.
 
     0.927
GAK83423.1
Type I restriction-modification system specificity subunit S.
 
  
 0.900
Your Current Organism:
Vibrio ponticus
NCBI taxonomy Id: 265668
Other names: CCUG 50742, CECT 5869, DSM 16217, V. ponticus, Vibrio ponticus Macian et al. 2005, Vibrio sp. JCM 19238, strain 369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.