Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAK83402.1 | GAK84048.1 | JCM19238_952 | JCM19238_1611 | UTP-glucose-1-phosphate uridylyltransferase. | Glucose-1-phosphate adenylyltransferase. | 0.713 |
GAK83402.1 | GAK86408.1 | JCM19238_952 | JCM19238_3998 | UTP-glucose-1-phosphate uridylyltransferase. | 1,4-alpha-glucan (glycogen) branching enzyme. | 0.651 |
GAK83402.1 | GAK86409.1 | JCM19238_952 | JCM19238_3999 | UTP-glucose-1-phosphate uridylyltransferase. | 1,4-alpha-glucan (glycogen) branching enzyme. | 0.651 |
GAK83402.1 | GAK86414.1 | JCM19238_952 | JCM19238_4004 | UTP-glucose-1-phosphate uridylyltransferase. | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.782 |
GAK83402.1 | GAK86961.1 | JCM19238_952 | JCM19238_4570 | UTP-glucose-1-phosphate uridylyltransferase. | Phosphoglucomutase. | 0.776 |
GAK83402.1 | GAK86962.1 | JCM19238_952 | JCM19238_4571 | UTP-glucose-1-phosphate uridylyltransferase. | Phosphoglucomutase. | 0.887 |
GAK83402.1 | glgC | JCM19238_952 | JCM19238_2579 | UTP-glucose-1-phosphate uridylyltransferase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.713 |
GAK83402.1 | pgi | JCM19238_952 | JCM19238_2311 | UTP-glucose-1-phosphate uridylyltransferase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.497 |
GAK84048.1 | GAK83402.1 | JCM19238_1611 | JCM19238_952 | Glucose-1-phosphate adenylyltransferase. | UTP-glucose-1-phosphate uridylyltransferase. | 0.713 |
GAK84048.1 | GAK86408.1 | JCM19238_1611 | JCM19238_3998 | Glucose-1-phosphate adenylyltransferase. | 1,4-alpha-glucan (glycogen) branching enzyme. | 0.943 |
GAK84048.1 | GAK86409.1 | JCM19238_1611 | JCM19238_3999 | Glucose-1-phosphate adenylyltransferase. | 1,4-alpha-glucan (glycogen) branching enzyme. | 0.944 |
GAK84048.1 | GAK86414.1 | JCM19238_1611 | JCM19238_4004 | Glucose-1-phosphate adenylyltransferase. | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.980 |
GAK84048.1 | GAK86961.1 | JCM19238_1611 | JCM19238_4570 | Glucose-1-phosphate adenylyltransferase. | Phosphoglucomutase. | 0.579 |
GAK84048.1 | GAK86962.1 | JCM19238_1611 | JCM19238_4571 | Glucose-1-phosphate adenylyltransferase. | Phosphoglucomutase. | 0.848 |
GAK86408.1 | GAK83402.1 | JCM19238_3998 | JCM19238_952 | 1,4-alpha-glucan (glycogen) branching enzyme. | UTP-glucose-1-phosphate uridylyltransferase. | 0.651 |
GAK86408.1 | GAK84048.1 | JCM19238_3998 | JCM19238_1611 | 1,4-alpha-glucan (glycogen) branching enzyme. | Glucose-1-phosphate adenylyltransferase. | 0.943 |
GAK86408.1 | GAK86409.1 | JCM19238_3998 | JCM19238_3999 | 1,4-alpha-glucan (glycogen) branching enzyme. | 1,4-alpha-glucan (glycogen) branching enzyme. | 0.992 |
GAK86408.1 | GAK86414.1 | JCM19238_3998 | JCM19238_4004 | 1,4-alpha-glucan (glycogen) branching enzyme. | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.988 |
GAK86408.1 | GAK86961.1 | JCM19238_3998 | JCM19238_4570 | 1,4-alpha-glucan (glycogen) branching enzyme. | Phosphoglucomutase. | 0.823 |
GAK86408.1 | GAK86962.1 | JCM19238_3998 | JCM19238_4571 | 1,4-alpha-glucan (glycogen) branching enzyme. | Phosphoglucomutase. | 0.940 |
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