Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAK82927.1 | GAK82928.1 | JCM19238_471 | JCM19238_472 | Chaperone protein HtpG. | Chaperone protein HtpG. | 0.994 |
GAK82927.1 | GAK86269.1 | JCM19238_471 | JCM19238_3859 | Chaperone protein HtpG. | DnaJ-related protein. | 0.990 |
GAK82927.1 | GAK87916.1 | JCM19238_471 | JCM19238_5526 | Chaperone protein HtpG. | Chaperone protein DnaK; Belongs to the heat shock protein 70 family. | 0.965 |
GAK82927.1 | GAK87917.1 | JCM19238_471 | JCM19238_5527 | Chaperone protein HtpG. | Chaperone protein DnaK. | 0.965 |
GAK82927.1 | GAK87918.1 | JCM19238_471 | JCM19238_5528 | Chaperone protein HtpG. | Chaperone protein DnaK. | 0.965 |
GAK82927.1 | GAK87919.1 | JCM19238_471 | JCM19238_5529 | Chaperone protein HtpG. | Chaperone protein DnaK. | 0.965 |
GAK82927.1 | GAK87920.1 | JCM19238_471 | JCM19238_5530 | Chaperone protein HtpG. | Sulfate permease. | 0.965 |
GAK82927.1 | dnaJ | JCM19238_471 | JCM19238_4524 | Chaperone protein HtpG. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.995 |
GAK82927.1 | grpE | JCM19238_471 | JCM19238_4521 | Chaperone protein HtpG. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.827 |
GAK82928.1 | GAK82927.1 | JCM19238_472 | JCM19238_471 | Chaperone protein HtpG. | Chaperone protein HtpG. | 0.994 |
GAK82928.1 | GAK86269.1 | JCM19238_472 | JCM19238_3859 | Chaperone protein HtpG. | DnaJ-related protein. | 0.990 |
GAK82928.1 | GAK87916.1 | JCM19238_472 | JCM19238_5526 | Chaperone protein HtpG. | Chaperone protein DnaK; Belongs to the heat shock protein 70 family. | 0.965 |
GAK82928.1 | GAK87917.1 | JCM19238_472 | JCM19238_5527 | Chaperone protein HtpG. | Chaperone protein DnaK. | 0.965 |
GAK82928.1 | GAK87918.1 | JCM19238_472 | JCM19238_5528 | Chaperone protein HtpG. | Chaperone protein DnaK. | 0.965 |
GAK82928.1 | GAK87919.1 | JCM19238_472 | JCM19238_5529 | Chaperone protein HtpG. | Chaperone protein DnaK. | 0.965 |
GAK82928.1 | GAK87920.1 | JCM19238_472 | JCM19238_5530 | Chaperone protein HtpG. | Sulfate permease. | 0.965 |
GAK82928.1 | dnaJ | JCM19238_472 | JCM19238_4524 | Chaperone protein HtpG. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.995 |
GAK82928.1 | grpE | JCM19238_472 | JCM19238_4521 | Chaperone protein HtpG. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.819 |
GAK86269.1 | GAK82927.1 | JCM19238_3859 | JCM19238_471 | DnaJ-related protein. | Chaperone protein HtpG. | 0.990 |
GAK86269.1 | GAK82928.1 | JCM19238_3859 | JCM19238_472 | DnaJ-related protein. | Chaperone protein HtpG. | 0.990 |
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