STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BP5553_08043Putative dopamine-responsive protein. (324 aa)    
Predicted Functional Partners:
BP5553_03889
Putative 40s ribosomal protein s29 protein.
  
 
 0.815
BP5553_00256
Uncharacterized protein.
  
  
 0.710
BP5553_09830
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.701
BP5553_09958
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.701
BP5553_04924
Uncharacterized protein.
    
 
 0.509
BP5553_02386
Histidine biosynthesis trifunctional protein.
   
 
 0.462
BP5553_07976
NOT2_3_5 domain-containing protein.
 
      0.461
BP5553_06291
Putative histidinol-phosphate transaminase.
     
 0.424
Your Current Organism:
Venustampulla echinocandica
NCBI taxonomy Id: 2656787
Other names: Helotiales sp. QY-2018a, NBRC BP-5553, Phialophora cf. hyalina BP 5553, V. echinocandica, Venustampulla echinocandica Unter., Reblova & Bills, 2019
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.