Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD11544.1 | SDD11569.1 | SAMN04488509_101290 | SAMN04488509_101291 | Hypothetical protein. | Peroxiredoxin. | 0.463 |
SDD11544.1 | SDD11587.1 | SAMN04488509_101290 | SAMN04488509_101292 | Hypothetical protein. | Thiol:disulfide interchange protein DsbD. | 0.412 |
SDD11569.1 | SDD11544.1 | SAMN04488509_101291 | SAMN04488509_101290 | Peroxiredoxin. | Hypothetical protein. | 0.463 |
SDD11569.1 | SDD11587.1 | SAMN04488509_101291 | SAMN04488509_101292 | Peroxiredoxin. | Thiol:disulfide interchange protein DsbD. | 0.918 |
SDD11569.1 | SDD11625.1 | SAMN04488509_101291 | SAMN04488509_101294 | Peroxiredoxin. | Iron complex transport system substrate-binding protein. | 0.453 |
SDD11569.1 | SDD15309.1 | SAMN04488509_101291 | SAMN04488509_101464 | Peroxiredoxin. | Homoserine dehydrogenase. | 0.403 |
SDD11569.1 | SDD53461.1 | SAMN04488509_101291 | SAMN04488509_103107 | Peroxiredoxin. | Thiol:disulfide interchange protein DsbD. | 0.540 |
SDD11569.1 | SDD60555.1 | SAMN04488509_101291 | SAMN04488509_104119 | Peroxiredoxin. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.441 |
SDD11569.1 | SDD65365.1 | SAMN04488509_101291 | SAMN04488509_1053 | Peroxiredoxin. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.403 |
SDD11569.1 | pdxH | SAMN04488509_101291 | SAMN04488509_101293 | Peroxiredoxin. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.447 |
SDD11587.1 | SDD11544.1 | SAMN04488509_101292 | SAMN04488509_101290 | Thiol:disulfide interchange protein DsbD. | Hypothetical protein. | 0.412 |
SDD11587.1 | SDD11569.1 | SAMN04488509_101292 | SAMN04488509_101291 | Thiol:disulfide interchange protein DsbD. | Peroxiredoxin. | 0.918 |
SDD11587.1 | SDD11625.1 | SAMN04488509_101292 | SAMN04488509_101294 | Thiol:disulfide interchange protein DsbD. | Iron complex transport system substrate-binding protein. | 0.504 |
SDD11587.1 | pdxH | SAMN04488509_101292 | SAMN04488509_101293 | Thiol:disulfide interchange protein DsbD. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.504 |
SDD11625.1 | SDD11569.1 | SAMN04488509_101294 | SAMN04488509_101291 | Iron complex transport system substrate-binding protein. | Peroxiredoxin. | 0.453 |
SDD11625.1 | SDD11587.1 | SAMN04488509_101294 | SAMN04488509_101292 | Iron complex transport system substrate-binding protein. | Thiol:disulfide interchange protein DsbD. | 0.504 |
SDD11625.1 | SDD60555.1 | SAMN04488509_101294 | SAMN04488509_104119 | Iron complex transport system substrate-binding protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.482 |
SDD11625.1 | pdxH | SAMN04488509_101294 | SAMN04488509_101293 | Iron complex transport system substrate-binding protein. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.799 |
SDD15309.1 | SDD11569.1 | SAMN04488509_101464 | SAMN04488509_101291 | Homoserine dehydrogenase. | Peroxiredoxin. | 0.403 |
SDD15309.1 | SDD60555.1 | SAMN04488509_101464 | SAMN04488509_104119 | Homoserine dehydrogenase. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.508 |
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