STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD06834.1Diguanylate cyclase (GGDEF) domain-containing protein. (1005 aa)    
Predicted Functional Partners:
SDD09655.1
PAS domain S-box-containing protein.
  
 0.955
SDD88010.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.946
SDD15642.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.931
SDD78576.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.927
SDD09671.1
PAS domain S-box-containing protein.
  
 0.918
SDE02234.1
PAS domain S-box-containing protein.
  
 0.918
SDD15652.1
PAS domain S-box-containing protein.
   
 0.917
SDD52269.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.914
SDD53701.1
PAS domain S-box-containing protein.
 
  0.912
SDE08122.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.912
Your Current Organism:
Aquimonas voraii
NCBI taxonomy Id: 265719
Other names: A. voraii, Aquimonas voraii Saha et al. 2005, DSM 16957, JCM 12896, MTCC 6713, strain GPTSA 20
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