Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD15652.1 | SDD34951.1 | SAMN04488509_101480 | SAMN04488509_102107 | PAS domain S-box-containing protein. | PAS domain-containing protein. | 0.990 |
SDD15652.1 | SDD35091.1 | SAMN04488509_101480 | SAMN04488509_102112 | PAS domain S-box-containing protein. | Peptidase family M48. | 0.670 |
SDD15652.1 | SDD42392.1 | SAMN04488509_101480 | SAMN04488509_102404 | PAS domain S-box-containing protein. | Lipoprotein NlpD. | 0.673 |
SDD15652.1 | SDD60829.1 | SAMN04488509_101480 | SAMN04488509_104129 | PAS domain S-box-containing protein. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.673 |
SDD15652.1 | SDD61335.1 | SAMN04488509_101480 | SAMN04488509_104152 | PAS domain S-box-containing protein. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.999 |
SDD15652.1 | SDD72254.1 | SAMN04488509_101480 | SAMN04488509_1066 | PAS domain S-box-containing protein. | Putative peptide modification system cyclase. | 0.905 |
SDD15652.1 | SDD72340.1 | SAMN04488509_101480 | SAMN04488509_1069 | PAS domain S-box-containing protein. | Putative peptide modification system cyclase. | 0.905 |
SDD15652.1 | SDD78576.1 | SAMN04488509_101480 | SAMN04488509_10730 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.988 |
SDD15652.1 | ribB | SAMN04488509_101480 | SAMN04488509_104121 | PAS domain S-box-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.874 |
SDD34951.1 | SDD15652.1 | SAMN04488509_102107 | SAMN04488509_101480 | PAS domain-containing protein. | PAS domain S-box-containing protein. | 0.990 |
SDD34951.1 | SDD35091.1 | SAMN04488509_102107 | SAMN04488509_102112 | PAS domain-containing protein. | Peptidase family M48. | 0.507 |
SDD34951.1 | SDD42392.1 | SAMN04488509_102107 | SAMN04488509_102404 | PAS domain-containing protein. | Lipoprotein NlpD. | 0.513 |
SDD34951.1 | SDD60829.1 | SAMN04488509_102107 | SAMN04488509_104129 | PAS domain-containing protein. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.513 |
SDD34951.1 | SDD61335.1 | SAMN04488509_102107 | SAMN04488509_104152 | PAS domain-containing protein. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.858 |
SDD34951.1 | SDD72254.1 | SAMN04488509_102107 | SAMN04488509_1066 | PAS domain-containing protein. | Putative peptide modification system cyclase. | 0.789 |
SDD34951.1 | SDD72340.1 | SAMN04488509_102107 | SAMN04488509_1069 | PAS domain-containing protein. | Putative peptide modification system cyclase. | 0.789 |
SDD34951.1 | SDD78576.1 | SAMN04488509_102107 | SAMN04488509_10730 | PAS domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.993 |
SDD34951.1 | ribB | SAMN04488509_102107 | SAMN04488509_104121 | PAS domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.793 |
SDD35091.1 | SDD15652.1 | SAMN04488509_102112 | SAMN04488509_101480 | Peptidase family M48. | PAS domain S-box-containing protein. | 0.670 |
SDD35091.1 | SDD34951.1 | SAMN04488509_102112 | SAMN04488509_102107 | Peptidase family M48. | PAS domain-containing protein. | 0.507 |
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