Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD22197.1 | SDD36883.1 | SAMN04488509_101791 | SAMN04488509_102187 | Transcriptional regulator, contains XRE-family HTH domain. | Serine/threonine-protein kinase HipA. | 0.807 |
SDD36672.1 | SDD36883.1 | SAMN04488509_102178 | SAMN04488509_102187 | Transcriptional regulator, XRE family. | Serine/threonine-protein kinase HipA. | 0.807 |
SDD36862.1 | SDD36883.1 | SAMN04488509_102186 | SAMN04488509_102187 | Hypothetical protein. | Serine/threonine-protein kinase HipA. | 0.512 |
SDD36862.1 | SDD36900.1 | SAMN04488509_102186 | SAMN04488509_102188 | Hypothetical protein. | HTH-type transcriptional regulator / antitoxin HipB. | 0.436 |
SDD36883.1 | SDD22197.1 | SAMN04488509_102187 | SAMN04488509_101791 | Serine/threonine-protein kinase HipA. | Transcriptional regulator, contains XRE-family HTH domain. | 0.807 |
SDD36883.1 | SDD36672.1 | SAMN04488509_102187 | SAMN04488509_102178 | Serine/threonine-protein kinase HipA. | Transcriptional regulator, XRE family. | 0.807 |
SDD36883.1 | SDD36862.1 | SAMN04488509_102187 | SAMN04488509_102186 | Serine/threonine-protein kinase HipA. | Hypothetical protein. | 0.512 |
SDD36883.1 | SDD36900.1 | SAMN04488509_102187 | SAMN04488509_102188 | Serine/threonine-protein kinase HipA. | HTH-type transcriptional regulator / antitoxin HipB. | 0.983 |
SDD36883.1 | SDD43862.1 | SAMN04488509_102187 | SAMN04488509_102457 | Serine/threonine-protein kinase HipA. | Protein of unknown function. | 0.807 |
SDD36883.1 | vapC | SAMN04488509_102187 | SAMN04488509_102189 | Serine/threonine-protein kinase HipA. | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.448 |
SDD36900.1 | SDD36862.1 | SAMN04488509_102188 | SAMN04488509_102186 | HTH-type transcriptional regulator / antitoxin HipB. | Hypothetical protein. | 0.436 |
SDD36900.1 | SDD36883.1 | SAMN04488509_102188 | SAMN04488509_102187 | HTH-type transcriptional regulator / antitoxin HipB. | Serine/threonine-protein kinase HipA. | 0.983 |
SDD43862.1 | SDD36883.1 | SAMN04488509_102457 | SAMN04488509_102187 | Protein of unknown function. | Serine/threonine-protein kinase HipA. | 0.807 |
vapC | SDD36883.1 | SAMN04488509_102189 | SAMN04488509_102187 | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Serine/threonine-protein kinase HipA. | 0.448 |