STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD42587.1Protein of unknown function. (400 aa)    
Predicted Functional Partners:
SDD42539.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.979
SDD42617.1
Protein of unknown function.
 
    0.969
SDD42635.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.960
SDD42662.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.960
SDD42562.1
MoxR-like ATPase.
 
    0.818
SDD15557.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.676
SDD25168.1
Hypothetical protein.
  
     0.635
SDD65413.1
Cro/C1-type HTH DNA-binding domain-containing protein.
  
     0.633
SDD15481.1
Hypothetical protein.
  
     0.623
SDD25142.1
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain.
  
     0.614
Your Current Organism:
Aquimonas voraii
NCBI taxonomy Id: 265719
Other names: A. voraii, Aquimonas voraii Saha et al. 2005, DSM 16957, JCM 12896, MTCC 6713, strain GPTSA 20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.