Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD19660.1 | SDD47245.1 | SAMN04488509_101662 | SAMN04488509_102591 | Iron complex outermembrane recepter protein. | Transcriptional regulator. | 0.450 |
SDD19660.1 | SDD91750.1 | SAMN04488509_101662 | SAMN04488509_11087 | Iron complex outermembrane recepter protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.610 |
SDD35106.1 | SDD38374.1 | SAMN04488509_102113 | SAMN04488509_102248 | RHS repeat-associated core domain-containing protein. | peptidyl-Asp metalloendopeptidase Metallo peptidase. MEROPS family M72. | 0.474 |
SDD35106.1 | SDD47245.1 | SAMN04488509_102113 | SAMN04488509_102591 | RHS repeat-associated core domain-containing protein. | Transcriptional regulator. | 0.465 |
SDD38374.1 | SDD35106.1 | SAMN04488509_102248 | SAMN04488509_102113 | peptidyl-Asp metalloendopeptidase Metallo peptidase. MEROPS family M72. | RHS repeat-associated core domain-containing protein. | 0.474 |
SDD38374.1 | SDD47245.1 | SAMN04488509_102248 | SAMN04488509_102591 | peptidyl-Asp metalloendopeptidase Metallo peptidase. MEROPS family M72. | Transcriptional regulator. | 0.575 |
SDD38374.1 | SDD91750.1 | SAMN04488509_102248 | SAMN04488509_11087 | peptidyl-Asp metalloendopeptidase Metallo peptidase. MEROPS family M72. | Outer membrane receptor proteins, mostly Fe transport. | 0.460 |
SDD47245.1 | SDD19660.1 | SAMN04488509_102591 | SAMN04488509_101662 | Transcriptional regulator. | Iron complex outermembrane recepter protein. | 0.450 |
SDD47245.1 | SDD35106.1 | SAMN04488509_102591 | SAMN04488509_102113 | Transcriptional regulator. | RHS repeat-associated core domain-containing protein. | 0.465 |
SDD47245.1 | SDD38374.1 | SAMN04488509_102591 | SAMN04488509_102248 | Transcriptional regulator. | peptidyl-Asp metalloendopeptidase Metallo peptidase. MEROPS family M72. | 0.575 |
SDD47245.1 | SDD47275.1 | SAMN04488509_102591 | SAMN04488509_102592 | Transcriptional regulator. | Hypothetical protein. | 0.783 |
SDD47245.1 | SDD51549.1 | SAMN04488509_102591 | SAMN04488509_10319 | Transcriptional regulator. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.455 |
SDD47245.1 | SDD54403.1 | SAMN04488509_102591 | SAMN04488509_103151 | Transcriptional regulator. | Hypothetical protein. | 0.780 |
SDD47245.1 | SDD54442.1 | SAMN04488509_102591 | SAMN04488509_103153 | Transcriptional regulator. | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.774 |
SDD47245.1 | SDD73071.1 | SAMN04488509_102591 | SAMN04488509_10636 | Transcriptional regulator. | Hypothetical protein. | 0.449 |
SDD47245.1 | SDD76089.1 | SAMN04488509_102591 | SAMN04488509_106173 | Transcriptional regulator. | PAS fold. | 0.458 |
SDD47245.1 | SDD91750.1 | SAMN04488509_102591 | SAMN04488509_11087 | Transcriptional regulator. | Outer membrane receptor proteins, mostly Fe transport. | 0.583 |
SDD47275.1 | SDD47245.1 | SAMN04488509_102592 | SAMN04488509_102591 | Hypothetical protein. | Transcriptional regulator. | 0.783 |
SDD51549.1 | SDD47245.1 | SAMN04488509_10319 | SAMN04488509_102591 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Transcriptional regulator. | 0.455 |
SDD51549.1 | SDD54403.1 | SAMN04488509_10319 | SAMN04488509_103151 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Hypothetical protein. | 0.876 |
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