STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD47522.1Penicillin amidase. (958 aa)    
Predicted Functional Partners:
SDE03300.1
Hypothetical protein.
  
     0.556
SDD79573.1
Protein of unknown function.
  
     0.503
SDD19175.1
Proline 4-hydroxylase (includes Rps23 Pro-64 3,4-dihydroxylase Tpa1), contains SM-20 domain.
  
    0.486
SDD17488.1
Hypothetical protein.
  
     0.453
SDD47500.1
Cytochrome c553.
       0.444
SDD15737.1
PAP2 superfamily protein.
  
     0.443
SDD95045.1
Hypothetical protein.
  
     0.443
SDD46644.1
2OG-Fe(II) oxygenase superfamily protein.
  
    0.439
SDD79641.1
Curli biogenesis system outer membrane secretion channel CsgG.
  
     0.409
SDD11004.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Aquimonas voraii
NCBI taxonomy Id: 265719
Other names: A. voraii, Aquimonas voraii Saha et al. 2005, DSM 16957, JCM 12896, MTCC 6713, strain GPTSA 20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.