STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD34155.1phospholipid/cholesterol/gamma-HCH transport system permease protein. (265 aa)    
Predicted Functional Partners:
SDD34124.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.992
SDD68908.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.984
SDD15369.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.978
SDD34097.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.977
SDD68961.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.977
SDD34169.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
   
  0.969
SDD15353.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.939
SDD24659.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
  0.868
SDD61450.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
   
  0.868
SDD34195.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
     0.853
Your Current Organism:
Aquimonas voraii
NCBI taxonomy Id: 265719
Other names: A. voraii, Aquimonas voraii Saha et al. 2005, DSM 16957, JCM 12896, MTCC 6713, strain GPTSA 20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.