STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD60459.1Glycosyl transferase family 41. (540 aa)    
Predicted Functional Partners:
SDD66477.1
Tetratricopeptide repeat-containing protein.
 
 0.904
SDE10602.1
Tetratricopeptide repeat-containing protein.
 
 0.755
SDD90560.1
Predicted methyltransferase, contains TPR repeat.
 
 0.754
SDD76282.1
Tetratricopeptide repeat-containing protein.
 
 0.750
SDD75033.1
Serine/threonine protein kinase.
 
 0.631
SDD62309.1
Serine/threonine protein kinase.
 
 0.618
SDD74751.1
Serine/threonine protein kinase.
 
 0.618
SDD13062.1
Serine/threonine protein kinase.
 
 0.617
SDD52729.1
Serine/threonine protein kinase.
 
 0.617
SDD25009.1
Serine/threonine protein kinase.
  
 0.568
Your Current Organism:
Aquimonas voraii
NCBI taxonomy Id: 265719
Other names: A. voraii, Aquimonas voraii Saha et al. 2005, DSM 16957, JCM 12896, MTCC 6713, strain GPTSA 20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.