Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD66110.1 | SDD66128.1 | SAMN04488509_10535 | SAMN04488509_10536 | VanZ like family protein. | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.773 |
SDD66110.1 | SDD66154.1 | SAMN04488509_10535 | SAMN04488509_10537 | VanZ like family protein. | Hypothetical protein. | 0.773 |
SDD66110.1 | SDD66174.1 | SAMN04488509_10535 | SAMN04488509_10538 | VanZ like family protein. | Hypothetical protein. | 0.773 |
SDD66110.1 | glmS | SAMN04488509_10535 | SAMN04488509_10534 | VanZ like family protein. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.565 |
SDD66110.1 | pdxJ | SAMN04488509_10535 | SAMN04488509_10533 | VanZ like family protein. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.565 |
SDD66128.1 | SDD66110.1 | SAMN04488509_10536 | SAMN04488509_10535 | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | VanZ like family protein. | 0.773 |
SDD66128.1 | SDD66154.1 | SAMN04488509_10536 | SAMN04488509_10537 | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Hypothetical protein. | 0.778 |
SDD66128.1 | SDD66174.1 | SAMN04488509_10536 | SAMN04488509_10538 | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Hypothetical protein. | 0.773 |
SDD66128.1 | glmS | SAMN04488509_10536 | SAMN04488509_10534 | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.772 |
SDD66128.1 | pdxJ | SAMN04488509_10536 | SAMN04488509_10533 | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.565 |
SDD66154.1 | SDD66110.1 | SAMN04488509_10537 | SAMN04488509_10535 | Hypothetical protein. | VanZ like family protein. | 0.773 |
SDD66154.1 | SDD66128.1 | SAMN04488509_10537 | SAMN04488509_10536 | Hypothetical protein. | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.778 |
SDD66154.1 | SDD66174.1 | SAMN04488509_10537 | SAMN04488509_10538 | Hypothetical protein. | Hypothetical protein. | 0.963 |
SDD66154.1 | glmS | SAMN04488509_10537 | SAMN04488509_10534 | Hypothetical protein. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.565 |
SDD66154.1 | pdxJ | SAMN04488509_10537 | SAMN04488509_10533 | Hypothetical protein. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.589 |
SDD66174.1 | SDD66110.1 | SAMN04488509_10538 | SAMN04488509_10535 | Hypothetical protein. | VanZ like family protein. | 0.773 |
SDD66174.1 | SDD66128.1 | SAMN04488509_10538 | SAMN04488509_10536 | Hypothetical protein. | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.773 |
SDD66174.1 | SDD66154.1 | SAMN04488509_10538 | SAMN04488509_10537 | Hypothetical protein. | Hypothetical protein. | 0.963 |
SDD66174.1 | glmS | SAMN04488509_10538 | SAMN04488509_10534 | Hypothetical protein. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.580 |
SDD66174.1 | pdxJ | SAMN04488509_10538 | SAMN04488509_10533 | Hypothetical protein. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.565 |
page 1 of 3