Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD15309.1 | SDD25095.1 | SAMN04488509_101464 | SAMN04488509_101924 | Homoserine dehydrogenase. | 2-oxoisovalerate dehydrogenase E1 component. | 0.476 |
SDD15309.1 | SDD45311.1 | SAMN04488509_101464 | SAMN04488509_102512 | Homoserine dehydrogenase. | Chorismate mutase. | 0.681 |
SDD15309.1 | SDD65365.1 | SAMN04488509_101464 | SAMN04488509_1053 | Homoserine dehydrogenase. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.992 |
SDD15309.1 | SDD74166.1 | SAMN04488509_101464 | SAMN04488509_10682 | Homoserine dehydrogenase. | Indolepyruvate ferredoxin oxidoreductase. | 0.473 |
SDD15309.1 | SDD78499.1 | SAMN04488509_101464 | SAMN04488509_10727 | Homoserine dehydrogenase. | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.959 |
SDD15309.1 | SDD79695.1 | SAMN04488509_101464 | SAMN04488509_10773 | Homoserine dehydrogenase. | Methionine aminotransferase. | 0.905 |
SDD15309.1 | SDE03031.1 | SAMN04488509_101464 | SAMN04488509_11453 | Homoserine dehydrogenase. | Glutamate synthase (NADPH) large subunit. | 0.725 |
SDD25095.1 | SDD15309.1 | SAMN04488509_101924 | SAMN04488509_101464 | 2-oxoisovalerate dehydrogenase E1 component. | Homoserine dehydrogenase. | 0.476 |
SDD25095.1 | SDD65365.1 | SAMN04488509_101924 | SAMN04488509_1053 | 2-oxoisovalerate dehydrogenase E1 component. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.476 |
SDD25095.1 | SDD74166.1 | SAMN04488509_101924 | SAMN04488509_10682 | 2-oxoisovalerate dehydrogenase E1 component. | Indolepyruvate ferredoxin oxidoreductase. | 0.826 |
SDD25095.1 | SDD79695.1 | SAMN04488509_101924 | SAMN04488509_10773 | 2-oxoisovalerate dehydrogenase E1 component. | Methionine aminotransferase. | 0.794 |
SDD25095.1 | gcvP | SAMN04488509_101924 | SAMN04488509_101620 | 2-oxoisovalerate dehydrogenase E1 component. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.410 |
SDD45311.1 | SDD15309.1 | SAMN04488509_102512 | SAMN04488509_101464 | Chorismate mutase. | Homoserine dehydrogenase. | 0.681 |
SDD45311.1 | SDD52805.1 | SAMN04488509_102512 | SAMN04488509_10377 | Chorismate mutase. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.501 |
SDD45311.1 | SDD65365.1 | SAMN04488509_102512 | SAMN04488509_1053 | Chorismate mutase. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.681 |
SDD45311.1 | SDD78499.1 | SAMN04488509_102512 | SAMN04488509_10727 | Chorismate mutase. | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.682 |
SDD45311.1 | SDD79666.1 | SAMN04488509_102512 | SAMN04488509_10772 | Chorismate mutase. | Carbon-nitrogen hydrolase. | 0.546 |
SDD45311.1 | SDD79695.1 | SAMN04488509_102512 | SAMN04488509_10773 | Chorismate mutase. | Methionine aminotransferase. | 0.839 |
SDD45311.1 | SDE03031.1 | SAMN04488509_102512 | SAMN04488509_11453 | Chorismate mutase. | Glutamate synthase (NADPH) large subunit. | 0.496 |
SDD45311.1 | gcvP | SAMN04488509_102512 | SAMN04488509_101620 | Chorismate mutase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.401 |
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