STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD82717.1LuxR family transcriptional regulator, quorum sensing-dependent transcriptional regulator. (245 aa)    
Predicted Functional Partners:
SDD09655.1
PAS domain S-box-containing protein.
   
 0.984
SDD09671.1
PAS domain S-box-containing protein.
   
 0.976
SDE02234.1
PAS domain S-box-containing protein.
   
 0.976
SDD68202.1
Hpt sensor hybrid histidine kinase.
   
 0.970
SDD82756.1
Acyl homoserine lactone synthase.
 
 0.923
SDD44364.1
PAS domain S-box-containing protein.
   
 0.863
SDD80679.1
Ligand-binding sensor domain-containing protein.
   
 0.853
SDD15652.1
PAS domain S-box-containing protein.
  
 0.845
SDE10727.1
Na+/proline symporter.
   
 0.823
SDD33985.1
PAS domain S-box-containing protein.
  
 0.801
Your Current Organism:
Aquimonas voraii
NCBI taxonomy Id: 265719
Other names: A. voraii, Aquimonas voraii Saha et al. 2005, DSM 16957, JCM 12896, MTCC 6713, strain GPTSA 20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.