STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD98219.1Uncharacterized protein involved in response to NO. (404 aa)    
Predicted Functional Partners:
SDD98203.1
Uncharacterized membrane protein SirB2.
 
     0.875
SDE11818.1
Nitric oxide reductase, NorZ apoprotein.
 
  
 0.558
SDD17193.1
Hypothetical protein.
  
     0.556
SDD09408.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.496
SDD90917.1
Hypothetical protein.
  
     0.495
SDD82995.1
Methyltransferase domain-containing protein.
  
     0.483
SDD67488.1
Protein of unknown function.
  
     0.472
SDD67111.1
AmpE protein.
  
     0.443
SDD17137.1
Hypothetical protein.
  
     0.421
SDD14624.1
Protein of unknown function.
  
     0.408
Your Current Organism:
Aquimonas voraii
NCBI taxonomy Id: 265719
Other names: A. voraii, Aquimonas voraii Saha et al. 2005, DSM 16957, JCM 12896, MTCC 6713, strain GPTSA 20
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