STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKC99328.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)    
Predicted Functional Partners:
KKC99478.1
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
  
     0.678
KKD01012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
KKC97874.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
KKD01794.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
KKD00217.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.600
KKC99751.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
KKC98829.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
KKC99690.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
KKD01824.1
Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
KKC99484.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
Your Current Organism:
Photobacterium halotolerans
NCBI taxonomy Id: 265726
Other names: CECT 5860, DSM 18316, LMG 22194, LMG:22194, P. halotolerans, Photobacterium halotolerans Rivas et al. 2006, Photobacterium sp. MELD1, strain MACL01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.