node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKC98018.1 | rplD | KY46_20610 | KY46_20995 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.951 |
KKC98018.1 | rplI | KY46_20610 | KY46_20370 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.950 |
KKC98018.1 | rpmA | KY46_20610 | KY46_19210 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. | 0.954 |
KKC98018.1 | rpmB | KY46_20610 | KY46_09410 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.949 |
KKC98018.1 | rpmC | KY46_20610 | KY46_21030 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L29; One of the stabilizing components for the large ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.951 |
KKC98018.1 | rpmG | KY46_20610 | KY46_09405 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.949 |
KKC98018.1 | rpmI | KY46_20610 | KY46_14205 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. | 0.958 |
KKC98018.1 | rpsE | KY46_20610 | KY46_21075 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.948 |
KKC98018.1 | rpsI | KY46_20610 | KY46_10430 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.953 |
KKC98018.1 | rpsP | KY46_20610 | KY46_20665 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.952 |
rplD | KKC98018.1 | KY46_20995 | KY46_20610 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.951 |
rplD | rplI | KY46_20995 | KY46_20370 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.999 |
rplD | rpmA | KY46_20995 | KY46_19210 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
rplD | rpmB | KY46_20995 | KY46_09410 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.999 |
rplD | rpmC | KY46_20995 | KY46_21030 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L29; One of the stabilizing components for the large ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
rplD | rpmG | KY46_20995 | KY46_09405 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
rplD | rpmI | KY46_20995 | KY46_14205 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. | 0.999 |
rplD | rpsE | KY46_20995 | KY46_21075 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplD | rpsI | KY46_20995 | KY46_10430 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplD | rpsP | KY46_20995 | KY46_20665 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |