STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001655635_02089Unannotated protein. (316 aa)    
Predicted Functional Partners:
GCA_001655635_02088
Unannotated protein.
 
   
 0.862
GCA_001655635_03238
Unannotated protein.
 
   
 0.685
GCA_001655635_00313
Unannotated protein.
 
 
 0.624
GCA_001655635_01947
Unannotated protein.
 
 
 0.565
GCA_001655635_00747
Unannotated protein.
 
 
 0.553
GCA_001655635_03195
Unannotated protein.
 
   
 0.534
GCA_001655635_01019
Unannotated protein.
  
  
 0.507
GCA_001655635_00575
Unannotated protein.
  
  
 0.498
GCA_001655635_02595
Unannotated protein.
    
 
 0.483
GCA_001655635_00450
Unannotated protein.
 
  
 0.482
Your Current Organism:
Photobacterium sp. J15
NCBI taxonomy Id: 265901
Other names: P. sp. J15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.