STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001655635_04192Unannotated protein. (352 aa)    
Predicted Functional Partners:
GCA_001655635_00638
Unannotated protein.
  
 
 0.906
GCA_001655635_03188
Unannotated protein.
    
 0.886
GCA_001655635_00637
Unannotated protein.
  
 
 0.855
GCA_001655635_00636
Unannotated protein.
  
  
 
0.711
GCA_001655635_01562
Unannotated protein.
  
  
 
0.710
GCA_001655635_00914
Unannotated protein.
    
 0.617
GCA_001655635_00045
Unannotated protein.
    
 0.615
GCA_001655635_03189
Unannotated protein.
  
 
 0.607
GCA_001655635_01133
Unannotated protein.
    
 0.587
GCA_001655635_01129
Unannotated protein.
  
 
 0.542
Your Current Organism:
Photobacterium sp. J15
NCBI taxonomy Id: 265901
Other names: P. sp. J15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.