STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001655635_05053Unannotated protein. (105 aa)    
Predicted Functional Partners:
GCA_001655635_02454
Unannotated protein.
    
 0.756
GCA_001655635_02283
Unannotated protein.
  
 
 0.750
GCA_001655635_05094
Unannotated protein.
  
 
 0.742
GCA_001655635_00661
Unannotated protein.
    
  0.701
GCA_001655635_05051
Unannotated protein.
 
     0.690
GCA_001655635_05050
Unannotated protein.
 
     0.673
GCA_001655635_05052
Unannotated protein.
       0.598
GCA_001655635_02831
Unannotated protein.
 
     0.442
GCA_001655635_00591
Unannotated protein.
  
  
  0.438
GCA_001655635_01769
Unannotated protein.
  
  
  0.411
Your Current Organism:
Photobacterium sp. J15
NCBI taxonomy Id: 265901
Other names: P. sp. J15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.