STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQU86320.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)    
Predicted Functional Partners:
AQU86871.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.709
AQU88885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.705
AQU86406.1
SGNH/GDSL hydrolase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
AQU88899.1
Hemolysin activation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.691
AQU87043.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
AQU88050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.680
AQU87914.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
AQU88827.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
AQU88514.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
AQU87060.1
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
  
     0.650
Your Current Organism:
Komagataeibacter nataicola
NCBI taxonomy Id: 265960
Other names: Gluconacetobacter nataicola, Gluconacetobacter nataicola Lisdiyanti et al. 2006, JCM 25120, K. nataicola, Komagataeibacter nataicola (Lisdiyanti et al. 2006) Yamada et al. 2013, NRIC 0616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.