STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQU89019.1Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)    
Predicted Functional Partners:
AQU86292.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
AQU86422.1
Type 1 glutamine amidotransferase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
    0.460
AQU87260.1
NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.441
AQU86838.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.434
AQU87180.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.434
AQU87449.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.434
AQU86513.1
Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family.
 
   
 0.424
AQU88802.1
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.416
AQU86514.1
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; Quinoprotein glucose dehydrogenase; catalyzes the formation of D-glucono-1,5-lactone from D-glucose and ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.416
AQU87900.1
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.416
Your Current Organism:
Komagataeibacter nataicola
NCBI taxonomy Id: 265960
Other names: Gluconacetobacter nataicola, Gluconacetobacter nataicola Lisdiyanti et al. 2006, JCM 25120, K. nataicola, Komagataeibacter nataicola (Lisdiyanti et al. 2006) Yamada et al. 2013, NRIC 0616
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.