STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rxyl_0027PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: nfa:nfa31920 putative serine/threonine protein kinase. (529 aa)    
Predicted Functional Partners:
Rxyl_0024
PFAM: protein phosphatase 2C-like; KEGG: ade:Adeh_3691 serine/threonine phosphatase.
 
 0.967
Rxyl_0026
PFAM: Forkhead-associated; KEGG: tfu:Tfu_3060 FHA domain protein.
 
 
 
 0.931
Rxyl_0025
FHA domain containing protein; PFAM: Forkhead-associated; KEGG: fra:Francci3_4431 FHA domain containing protein.
 
 
 
 0.924
Rxyl_0021
PFAM: protein kinase PASTA; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: tte:TTE1500 serine/threonine protein kinase.
 
 
0.846
Rxyl_0023
PFAM: cell cycle protein; KEGG: mbo:Mb0017c probable cell division protein RodA; Belongs to the SEDS family.
  
 
 0.804
Rxyl_0022
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; KEGG: tte:TTE1967 cell division protein FtsI/penicillin-binding protein 2.
  
  
 0.790
Rxyl_1434
FHA domain containing protein; PFAM: Forkhead-associated; KEGG: sco:SCO1384 hypothetical protein.
 
 
 
 0.697
Rxyl_2663
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like Hpt PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif; KEGG: cyb:CYB_1640 sensory box histidine kinase/response regulator.
 
 
 
 0.499
Rxyl_1268
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like Hpt PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif; KEGG: mag:amb3438 sensor protein GacS.
 
 
 
 0.494
Rxyl_0560
Protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis; KEGG: fra:Francci3_3472 protein-tyrosine kinase.
    
 
 0.431
Your Current Organism:
Rubrobacter xylanophilus
NCBI taxonomy Id: 266117
Other names: R. xylanophilus DSM 9941, Rubrobacter xylanophilus DSM 9941, Rubrobacter xylanophilus str. DSM 9941, Rubrobacter xylanophilus strain DSM 9941
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