Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Rxyl_0981 | Rxyl_0982 | Hypothetical protein. | PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cyb:CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein. | 0.773 |
Rxyl_0981 | Rxyl_0983 | Hypothetical protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cya:CYA_2571 quaternary amine ABC transporter (QAT) family, permease protein. | 0.678 |
Rxyl_0981 | Rxyl_0984 | Hypothetical protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_2960 binding-protein-dependent transport systems inner membrane component. | 0.678 |
Rxyl_0981 | Rxyl_0985 | Hypothetical protein. | PFAM: ABC transporter related; SMART: ATPase; KEGG: sco:SCO2931 putative ABC transporter ATP-binding protein. | 0.678 |
Rxyl_0981 | Rxyl_0986 | Hypothetical protein. | Hypothetical protein. | 0.429 |
Rxyl_0981 | Rxyl_0987 | Hypothetical protein. | Hypothetical protein. | 0.429 |
Rxyl_0982 | Rxyl_0981 | PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cyb:CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein. | Hypothetical protein. | 0.773 |
Rxyl_0982 | Rxyl_0983 | PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cyb:CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cya:CYA_2571 quaternary amine ABC transporter (QAT) family, permease protein. | 0.999 |
Rxyl_0982 | Rxyl_0984 | PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cyb:CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_2960 binding-protein-dependent transport systems inner membrane component. | 0.999 |
Rxyl_0982 | Rxyl_0985 | PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cyb:CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein. | PFAM: ABC transporter related; SMART: ATPase; KEGG: sco:SCO2931 putative ABC transporter ATP-binding protein. | 0.995 |
Rxyl_0982 | Rxyl_0986 | PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cyb:CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein. | Hypothetical protein. | 0.429 |
Rxyl_0982 | Rxyl_0987 | PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cyb:CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein. | Hypothetical protein. | 0.429 |
Rxyl_0983 | Rxyl_0981 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cya:CYA_2571 quaternary amine ABC transporter (QAT) family, permease protein. | Hypothetical protein. | 0.678 |
Rxyl_0983 | Rxyl_0982 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cya:CYA_2571 quaternary amine ABC transporter (QAT) family, permease protein. | PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cyb:CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein. | 0.999 |
Rxyl_0983 | Rxyl_0984 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cya:CYA_2571 quaternary amine ABC transporter (QAT) family, permease protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_2960 binding-protein-dependent transport systems inner membrane component. | 0.902 |
Rxyl_0983 | Rxyl_0985 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cya:CYA_2571 quaternary amine ABC transporter (QAT) family, permease protein. | PFAM: ABC transporter related; SMART: ATPase; KEGG: sco:SCO2931 putative ABC transporter ATP-binding protein. | 0.996 |
Rxyl_0983 | Rxyl_0986 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cya:CYA_2571 quaternary amine ABC transporter (QAT) family, permease protein. | Hypothetical protein. | 0.480 |
Rxyl_0983 | Rxyl_0987 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cya:CYA_2571 quaternary amine ABC transporter (QAT) family, permease protein. | Hypothetical protein. | 0.480 |
Rxyl_0984 | Rxyl_0981 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_2960 binding-protein-dependent transport systems inner membrane component. | Hypothetical protein. | 0.678 |
Rxyl_0984 | Rxyl_0982 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_2960 binding-protein-dependent transport systems inner membrane component. | PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cyb:CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein. | 0.999 |
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