STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rxyl_1264L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (453 aa)    
Predicted Functional Partners:
Rxyl_2994
TIGRFAM: Iron-sulfur cluster binding protein; KEGG: bat:BAS3036 iron-sulfur cluster-binding protein.
 
  
 0.862
Rxyl_2375
FAD linked oxidase-like protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding protein of unknown function DUF224, cysteine-rich region FAD linked oxidase-like; KEGG: gvi:glr3436 probable oxidoreductase.
 
  
 0.772
Rxyl_2720
FAD linked oxidase-like protein; PFAM: protein of unknown function DUF224, cysteine-rich region FAD linked oxidase-like; KEGG: noc:Noc_0464 hypothetical protein.
 
  
 0.772
Rxyl_2999
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase ferredoxin-dependent glutamate synthase; KEGG: ava:Ava_1430 FMN-dependent alpha-hydroxy acid dehydrogenase.
 
  
 0.702
Rxyl_3151
(S)-2-hydroxy-acid oxidase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mpa:MAP4154 L-Lactate dehydrogenase (cytochrome).
 
  
 0.702
Rxyl_1052
Lactate 2-monooxygenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: tth:TTC1744 lactate 2-monooxygenase.
 
  
 0.700
Rxyl_2993
PFAM: protein of unknown function DUF162; KEGG: sth:STH93 hypothetical protein.
 
  
 0.667
Rxyl_0815
TIGRFAM: IMP dehydrogenase related 2; PFAM: IMP dehydrogenase/GMP reductase; KEGG: tfu:Tfu_2595 IMP dehydrogenase related 2.
  
  
 0.666
fni
Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.658
Rxyl_2995
PFAM: protein of unknown function DUF224, cysteine-rich region; KEGG: sth:STH95 glycolate oxidase.
 
  
 0.624
Your Current Organism:
Rubrobacter xylanophilus
NCBI taxonomy Id: 266117
Other names: R. xylanophilus DSM 9941, Rubrobacter xylanophilus DSM 9941, Rubrobacter xylanophilus str. DSM 9941, Rubrobacter xylanophilus strain DSM 9941
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.