STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rxyl_1267PFAM: Quinolinate phosphoribosyl transferase; KEGG: tko:TK1676 nicotinate-nucleotide pyrophosphorylase. (377 aa)    
Predicted Functional Partners:
Rxyl_2558
TIGRFAM: Competence-damaged protein; PFAM: molybdopterin binding domain CinA-like; KEGG: tte:TTE1375 predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA.
 
 
 0.977
Rxyl_0106
KEGG: gsu:GSU1936 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; Belongs to the NadC/ModD family.
   
 0.967
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
 
 0.958
Rxyl_0306
PFAM: metallophosphoesterase 5'-Nucleotidase-like; KEGG: gka:GK1763 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
 0.910
surE
3'-nucleotidase / 5'-nucleotidase / exopolyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.904
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.840
Rxyl_0483
KEGG: dps:DP2296 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein).
  
    0.745
Rxyl_1268
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like Hpt PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif; KEGG: mag:amb3438 sensor protein GacS.
     
 0.618
Rxyl_0842
Cobalamin-independent synthase MetE-like protein; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
     0.613
Rxyl_0141
PFAM: isochorismatase hydrolase; KEGG: ape:APE2350 isochorismatase.
 
  
 0.571
Your Current Organism:
Rubrobacter xylanophilus
NCBI taxonomy Id: 266117
Other names: R. xylanophilus DSM 9941, Rubrobacter xylanophilus DSM 9941, Rubrobacter xylanophilus str. DSM 9941, Rubrobacter xylanophilus strain DSM 9941
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.