STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rxyl_16965-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase Hydantoinaseoxoprolinase-like; KEGG: nph:NP6218A N-methylhydantoinase (ATP-hydrolyzing) A 2. (684 aa)    
Predicted Functional Partners:
Rxyl_1695
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: nph:NP6216A N-methylhydantoinase (ATP-hydrolyzing) B 2.
 0.999
Rxyl_2411
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: hma:pNG7165 N-methylhydantoinase B.
 0.998
Rxyl_1850
PFAM: Hydantoinase/oxoprolinase Hydantoinaseoxoprolinase-like; KEGG: eba:c1A105 possible subunit of acetophenone carboxylase.
  
  
 
0.928
Rxyl_2410
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase Hydantoinaseoxoprolinase-like; KEGG: gvi:gll2098 N-methylhydantoinase A, putative.
  
  
 
0.912
Rxyl_1847
PFAM: Hydantoinase B/oxoprolinase; KEGG: eba:c1A100 possible subunit of acetophenone carboxylase.
 
 0.903
Rxyl_0224
N-isopropylammelide isopropylaminohydrolase; PFAM: amidohydrolase Amidohydrolase 3; KEGG: bcl:ABC4032 cytosine deaminase.
     
  0.900
Rxyl_1849
KEGG: eba:c1A200 possible subunit of acetophenone carboxylase.
 
 
 
 0.840
Rxyl_1694
PFAM: isochorismatase hydrolase; KEGG: nph:NP6214A homolog 1 to N-carbamoylsarcosine amidase.
 
     0.822
Rxyl_1692
TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase-like; KEGG: pab:PAB0892 3-isopropylmalate dehydratase small subunit; Belongs to the LeuD family.
       0.779
leuC2
Homoaconitate hydratase family protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
       0.779
Your Current Organism:
Rubrobacter xylanophilus
NCBI taxonomy Id: 266117
Other names: R. xylanophilus DSM 9941, Rubrobacter xylanophilus DSM 9941, Rubrobacter xylanophilus str. DSM 9941, Rubrobacter xylanophilus strain DSM 9941
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