STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rxyl_3077TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: Haloacid dehalogenase-like hydrolase cation transporting ATPase-like E1-E2 ATPase-associated region; KEGG: mma:MM1461 cation-transporting ATPase. (834 aa)    
Predicted Functional Partners:
Rxyl_3076
TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: cation transporting ATPase-like Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region; KEGG: mth:MTH1516 cation-transporting P-ATPase PacL.
 
    
0.646
Rxyl_2934
PFAM: MgtC/SapB transporter; KEGG: chy:CHY_1773 MgtC family protein.
  
 
 0.608
Rxyl_3165
PFAM: CBS peptidase M50; KEGG: sil:SPO1636 SREBP protease/CBS domain; Belongs to the peptidase M50B family.
 
 
 0.522
Rxyl_0019
PFAM: beta-lactamase-like RNA-metabolising metallo-beta-lactamase; KEGG: pfu:PF1405 cleavage and polyadenylation specifity factor protein.
 
 
 0.449
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.423
Rxyl_3069
DoxX; PFAM: DoxX; KEGG: sth:STH2407 hypothetical protein.
 
 
  0.414
Your Current Organism:
Rubrobacter xylanophilus
NCBI taxonomy Id: 266117
Other names: R. xylanophilus DSM 9941, Rubrobacter xylanophilus DSM 9941, Rubrobacter xylanophilus str. DSM 9941, Rubrobacter xylanophilus strain DSM 9941
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