STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG58202.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)    
Predicted Functional Partners:
parC
DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
   
    0.822
KRG58201.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.807
minE
Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.761
KRG57808.1
PhoU family transcriptional regulator; Plays a role in the regulation of phosphate uptake.
   
    0.651
gltB
Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.600
KRG58200.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.560
lolB
Hypothetical protein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
   
    0.540
KRG59526.1
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.
   
    0.527
KRG59555.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.518
KRG57022.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.516
Your Current Organism:
Stenotrophomonas koreensis
NCBI taxonomy Id: 266128
Other names: DSM 17805, JCM 13256, KCTC 12211, S. koreensis, Stenotrophomonas koreensis Yang et al. 2006, Stenotrophomonas sp. DSM 17805, Stenotrophomonas sp. TR6-01, strain TR6-01
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