STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG56658.1Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)    
Predicted Functional Partners:
KRG56659.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.893
KRG56696.1
Phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.872
KRG56656.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.809
KRG56657.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.789
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.767
KRG56660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.761
KRG56655.1
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.653
KRG58408.1
Polysaccharide biosynthesis protein GumB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.645
KRG56654.1
UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.603
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.532
Your Current Organism:
Stenotrophomonas koreensis
NCBI taxonomy Id: 266128
Other names: DSM 17805, JCM 13256, KCTC 12211, S. koreensis, Stenotrophomonas koreensis Yang et al. 2006, Stenotrophomonas sp. DSM 17805, Stenotrophomonas sp. TR6-01, strain TR6-01
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