STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0008Binding-protein-dependent transport systems inner membrane component. (295 aa)    
Predicted Functional Partners:
Rmet_0009
Binding-protein-dependent transport systems inner membrane component.
 
 0.985
ugpC
Glycerol-3-phosphate transporter subunit; ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.
 
 
 0.977
Rmet_0011
Putative sugar uptake ABC transporter.
 
 
 0.960
ugpA
Glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily.
 
 0.929
ugpC-2
Glycerol-3-phosphate transporter subunit; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 
 0.908
Rmet_2232
ABC-type sugar transport systems, permease component.
 
 
 0.898
ugpB
Glycerol-3-phosphate transporter subunit; periplasmic-binding component of ABC superfamily.
 
 
 0.832
Rmet_2233
ABC-type transporter, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.821
Rmet_2234
ABC-type transporter, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.804
Rmet_0007
Transcriptional regulator, araC family.
  
  
 0.667
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.