STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpCGlycerol-3-phosphate transporter subunit; ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily. (345 aa)    
Predicted Functional Partners:
Rmet_0009
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.980
Rmet_0008
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.977
ugpE
Glycerol-3-phosphate transporter subunit; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.902
ugpA
Glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily.
 
 
 0.901
Rmet_0011
Putative sugar uptake ABC transporter.
 
 
 0.881
Rmet_2232
ABC-type sugar transport systems, permease component.
 
 
 0.769
Rmet_2231
ABC-type transporter, permease component.
 
 
 0.763
ugpB
Glycerol-3-phosphate transporter subunit; periplasmic-binding component of ABC superfamily.
 
 
 0.702
Rmet_0007
Transcriptional regulator, araC family.
  
  
 0.662
Rmet_2229
ABC-type sugar transporter, periplasmic component, probable sugar binding precursor.
  
 
 0.523
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.