STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0075Conserved hypothetical protein. (264 aa)    
Predicted Functional Partners:
Rmet_0068
Predicted integral membrane protein.
 
     0.792
pilI
Type IV pilus signal transduction protein PilI.
  
  
 0.768
Rmet_2470
Type IV-pili assembly fimV-related transmembrane protein.
  
    0.752
Rmet_3475
Putative ABC-type branched-chain amino acid transport system, periplasmic component.
  
     0.739
Rmet_2419
Conserved hypothetical protein; putative transmembrane protein.
  
     0.735
coaX
Putative transcriptional regulator, BAF-family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.
 
    0.724
eal
Putative signalling protein EAL.
  
     0.724
ftsA
ATP-binding cell division protein involved in recruitment of FtsK to Z ring; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
  
 
 0.721
birA
Biotin-(acetyl-CoA carboxylase) ligase.
 
    0.718
Rmet_0294
Putative GTPase.
  
    0.705
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.