STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0077Conserved hypothetical protein. (286 aa)    
Predicted Functional Partners:
Rmet_0079
Conserved hypothetical protein.
 
    0.634
hldC
D-beta-D-heptose 1-phosphate adenylyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
  
    0.614
rssA
Predicted esterase of the alpha-beta hydrolase superfamily.
  
    0.495
Rmet_3283
ResB-like cytochrome c maturation protein.
  
    0.445
Rmet_0941
Conserved hypothetical protein.
  
    0.431
Rmet_1198
Putative 20S proteasome, A and B subunits.
  
     0.422
Rmet_0080
Enoyl-CoA hydratase (ECH); Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.407
Rmet_0373
Conserved hypothetical protein.
 
    0.407
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.