STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0099Dehydrogenase/reductase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)    
Predicted Functional Partners:
Rmet_0100
Putative periplasmic metal ion binding protein.
  
    0.783
Rmet_3320
Putative short chain dehydrogenase/reductase.
 
 
 
 0.629
chnA
Cyclohexanol dehydrogenase (protein belongs to CMGI-2).
 
 
 0.628
dsbA
Thiol-disulfide interchange protein DsbA.
  
    0.597
Rmet_2604
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.593
tsaC
Alcohol dehydrogenase.
 
 
 0.569
Rmet_3568
Conserved hypothetical protein.
  
    0.433
Rmet_0097
Conserved hypothetical protein.
  
    0.429
Rmet_0182
Putative short chain dehydrogenase/reductase SDR, oxidoreductase protein.
 
 
 0.424
Rmet_0095
Conserved hypothetical protein.
 
    0.409
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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