STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0111Conserved hypothetical protein; Belongs to the UPF0225 family. (141 aa)    
Predicted Functional Partners:
Rmet_0110
HAD-superfamily hydrolase, subfamily IA.
  
    0.797
Rmet_0109
2-hydroxychromene-2-carboxylate isomerase.
  
    0.787
Rmet_0107
Short-chain dehydrogenase/reductase SDR.
 
    0.638
Rmet_0112
Conserved hypothetical signal peptide protein.
  
    0.605
Rmet_0108
acyl-CoA dehydrogenase, short-chain specific.
  
    0.549
eamA
Cysteine and O-acetyl-L-serine efflux system.
  
   
 0.506
Rmet_0113
Enoyl-CoA hydratase/carnithine racemase.
  
    0.468
atoB
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.438
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.