STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0193Putative Type-4 pilus assembly protein PilE (pilE1). (147 aa)    
Predicted Functional Partners:
Rmet_0192
Putative type-4 fimbrial biogenesis pilY1-related protein.
 
  
 0.971
Rmet_0190
Putative type 4 fimbrial biogenesis transmembrane protein, pilW.
 
  
 0.967
Rmet_0188
Putative type-4 fimbrial pilin related signal peptide protein.
 
  
 0.962
Rmet_0191
Putative type-4 fimbrial biogenesis transmembrane protein, pilX.
 
  
 0.955
Rmet_0189
Putative type-4 fimbrial biogenesis pilV transmembrane protein.
 
  
 0.943
pilN
Tfp pilus assembly protein PilN.
 
  
 0.811
pilM
Type IV pilus assembly protein PilM.
 
  
 0.791
pilP
Type IV pilus assembly protein PilP.
  
  
 0.788
pilQ
Pili assembly protein PilQ.
 
  
 0.772
pilO
Type IV pilus assembly protein PilO.
 
  
 0.766
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.