STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaKPhenylacetate--CoA ligase. (420 aa)    
Predicted Functional Partners:
livF8
Leucine/isoleucine/valine transporter subunit, ATP-binding component of ABC superfamily.
 
    0.936
paaI
Phenylacetate pathway hotdog-fold thioesterase.
 
 
 0.932
paaK-2
phenylacetyl-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
  
 
0.924
paaJ
Subunit of the phenylacetyl-CoA oxygenase/reductase.
  
 
 0.923
paaA
Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
  
 
 0.922
paaB
Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
  
 
 0.922
paaC
Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
  
 
 0.918
paaD
Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
  
 
 0.917
Rmet_0218
ABC-type transporter, periplasmic component: HAAT family.
 
    0.906
Rmet_1937
Amidase; Belongs to the amidase family.
    
  0.902
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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