STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0233Thiol-disulfide isomerase-like and thioredoxin-like protein. (179 aa)    
Predicted Functional Partners:
dsbE
Putative thiol:disulfide interchange protein.
 
  
 0.783
Rmet_3283
ResB-like cytochrome c maturation protein.
 
  
 0.709
Rmet_3282
ABC-type transport system involved in cytochrome c biogenesis, permease component.
 
  
 0.696
Rmet_0941
Conserved hypothetical protein.
  
    0.637
Rmet_0234
Conserved hypothetical protein.
  
  
 0.543
Rmet_0232
Putative ATP-dependent DNA helicase.
  
  
 0.487
Rmet_1170
Cytochrome c biogenesis protein, transmembrane region.
  
  
0.482
Rmet_0235
Conserved hypothetical protein.
 
     0.474
sco2
Cytochrome oxidase assembly protein, Sco1/SenC family.
 
  
 0.449
ribD
Fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.445
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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