STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nasEABC-type transporter, permease component: NitT family. (303 aa)    
Predicted Functional Partners:
nasD
Nitrate ATP-binding ABC transporter protein.
 
 0.995
nasF
ABC-type transporter, periplasmic component: NitT family.
 
 
 0.993
narH
Nitrate reductase 1, beta (Fe-S) subunit.
   
 
  0.903
narG
Nitrate reductase 1, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.900
narI
Nitrate reductase 1, gamma (cytochrome b(NR)) subunit.
     
  0.900
tauB-2
Taurine transporter subunit; ATP-binding component of ABC superfamily.
  
 0.832
tauB
ABC transporter ATP-binding protein : TauT family.
  
 0.806
ssuB1
Alkanesulfonate transporter subunit; ATP-binding component of ABC superfamily.
  
 0.799
Rmet_2121
ABC-type transporter, ATPase component: NitT family.
  
 0.762
tauA
Taurine ABC-type transporter, periplasmic component.
 
  
 0.723
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.