STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0296Peptidase S16, lon-like protein. (217 aa)    
Predicted Functional Partners:
Rmet_0297
Probable nucleoside triphosphate hydrolase domain protein; Displays ATPase and GTPase activities.
  
    0.674
Rmet_2830
Hypothetical protein.
   
 0.567
Rmet_2906
Conserved hypothetical protein.
 
    0.532
Rmet_3537
Putative histone-lysine N-methyltransferase.
  
 0.522
moeB
Molybdopterin synthase sulfurylase.
   
 0.505
Rmet_3040
Uncharacterized protein; Predicted hydrolase (metallo-beta-lactamase superfamily).
   
 0.500
Rmet_2339
Conserved hypothetical protein.
    
 0.499
Rmet_1266
Putative RNA Modifying Enzyme.
     
 0.439
Rmet_0298
Conserved hypothetical protein; signal peptide protein; putative exported protein.
       0.425
Rmet_2636
Thioredoxin domain-containing protein.
 
  
 0.425
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.