STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coxICarbon monoxide dehydrogenase accessory protein. (345 aa)    
Predicted Functional Partners:
Rmet_0358
Conserved hypothetical protein.
 
  
 0.969
coxS
Putative carbon monoxide dehydrogenase, 2Fe-2S iron-sulfur small subunit.
 
  
 0.913
coxM
Putative carbon-monoxide dehydrogenase (acceptor).
 
  
 0.888
coxG
Carbon monoxide dehydrogenase accessory protein.
 
    0.835
Rmet_1416
2Fe-2S iron-sulfur cluster binding domain protein.
 
  
 0.827
coxE
Carbon monoxide dehydrogenase accessory protein.
 
    0.825
iorA
Isoquinoline 1-oxidoreductase subunit alpha.
 
  
 0.825
coxL
Putative carbon-monoxide dehydrogenase, large subunt.
 
  
 0.821
iorB
Isoquinoline 1-oxidoreductase subunit beta.
 
  
 0.808
coxD
Putative carbon monoxide dehydrogenase accessory protein, putative chaperone-like ATPase, involved in protein complex assembly.
  
    0.786
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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