STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0392ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component: TauT family. (352 aa)    
Predicted Functional Partners:
Rmet_0394
ABC-type transporter, permease component: TauT family.
 
  
 0.962
tauB
ABC transporter ATP-binding protein : TauT family.
 
  
 0.960
tauA
Taurine ABC-type transporter, periplasmic component.
  
    0.653
tauC
Taurine ABC-type transporter, permease component: TauT family.
 
  
 0.627
Rmet_2220
ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
 
  
 0.589
tauB-2
Taurine transporter subunit; ATP-binding component of ABC superfamily.
 
  
 0.546
Rmet_2120
ABC-type transporter, permease component: TauT family.
 
  
 0.525
ssuC
Alkanesulfonate transporter subunit; membrane component of ABC superfamily.
  
  
 0.510
dppA-2
ABC-type transporter, periplasmic component: PepT family.
  
  
 0.500
ssuB1
Alkanesulfonate transporter subunit; ATP-binding component of ABC superfamily.
 
  
 0.490
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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