STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0474Putative lipidA core O-antigen ligase transmembrane protein. (595 aa)    
Predicted Functional Partners:
Rmet_2720
Putative lipopolysaccharide biosynthesis protein.
 
  
 0.813
Rmet_3542
Hypothetical protein.
  
     0.752
Rmet_1233
Hypothetical protein.
  
    0.750
Rmet_1740
Putative membrane protein.
 
  
 0.738
Rmet_2594
Conserved hypothetical protein (secreted).
 
   
 0.733
Rmet_2706
Conserved hypothetical protein; putative transmembrane protein.
  
     0.732
Rmet_3120
Conserved hypothetical protein.
 
     0.725
Rmet_0877
Conserved hypothetical protein; putative exported lipoprotein transmembrane protein.
  
     0.715
Rmet_1427
Conserved hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
    0.712
Rmet_3374
Conserved hypothetical protein.
  
     0.712
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.